Biomedical Image Registration


Editorial for the Workshop on Biomedical Image Registration (WBIR) 2016
Julia A. Schnabel,
Kensaku Mori,
Ben Glocker,
Mattias P. Heinrich
[pdf]
[bibtex]
@InProceedings{Schnabel_2016_CVPR_Workshops,
author = {Schnabel, Julia A. and Mori, Kensaku and Glocker, Ben and Heinrich, Mattias P.},
title = {Editorial for the Workshop on Biomedical Image Registration (WBIR) 2016},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Discrete Optimisation for Group-Wise Cortical Surface Atlasing
Emma C. Robinson,
Ben Glocker,
Martin Rajchl,
Daniel Rueckert
[pdf]
[bibtex]
@InProceedings{Robinson_2016_CVPR_Workshops,
author = {Robinson, Emma C. and Glocker, Ben and Rajchl, Martin and Rueckert, Daniel},
title = {Discrete Optimisation for Group-Wise Cortical Surface Atlasing},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Sparse Kernel Machines for Discontinuous Registration and Nonstationary Regularization
Christoph Jud,
Nadia Mori,
Philippe C. Cattin
[pdf]
[bibtex]
@InProceedings{Jud_2016_CVPR_Workshops,
author = {Jud, Christoph and Mori, Nadia and Cattin, Philippe C.},
title = {Sparse Kernel Machines for Discontinuous Registration and Nonstationary Regularization},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Accurate Small Deformation Exponential Approximant to Integrate Large Velocity Fields: Application to Image Registration
Sebastiano Ferraris,
Marco Lorenzi,
Pankaj Daga,
Marc Modat,
Tom Vercauteren
[pdf]
[bibtex]
@InProceedings{Ferraris_2016_CVPR_Workshops,
author = {Ferraris, Sebastiano and Lorenzi, Marco and Daga, Pankaj and Modat, Marc and Vercauteren, Tom},
title = {Accurate Small Deformation Exponential Approximant to Integrate Large Velocity Fields: Application to Image Registration},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Fast Deformable Image Registration With Non-Smooth Dual Optimization
Martin Rajchl,
John S.H Baxter,
Wu Qiu,
Ali R. Khan,
Aaron Fenster,
Terry M. Peters,
Daniel Rueckert,
Jing Yuan
[pdf]
[bibtex]
@InProceedings{Rajchl_2016_CVPR_Workshops,
author = {Rajchl, Martin and Baxter, John S.H and Qiu, Wu and Khan, Ali R. and Fenster, Aaron and Peters, Terry M. and Rueckert, Daniel and Yuan, Jing},
title = {Fast Deformable Image Registration With Non-Smooth Dual Optimization},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Image Registration for Placenta Reconstruction
Floris Gaisser,
Pieter P. Jonker,
Toshio Chiba
[pdf]
[bibtex]
@InProceedings{Gaisser_2016_CVPR_Workshops,
author = {Gaisser, Floris and Jonker, Pieter P. and Chiba, Toshio},
title = {Image Registration for Placenta Reconstruction},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Tissue-Volume Preserving Deformable Image Registration for 4DCT Pulmonary Images
Bowen Zhao,
Gary E. Christensen,
Joo Hyun Song,
Yue Pan,
Sarah E. Gerard,
Joseph M. Reinhardt,
Kaifang Du,
Taylor Patton,
John M. Bayouth,
Geoffrey D. Hugo
[pdf]
[bibtex]
@InProceedings{Zhao_2016_CVPR_Workshops,
author = {Zhao, Bowen and Christensen, Gary E. and Hyun Song, Joo and Pan, Yue and Gerard, Sarah E. and Reinhardt, Joseph M. and Du, Kaifang and Patton, Taylor and Bayouth, John M. and Hugo, Geoffrey D.},
title = {Tissue-Volume Preserving Deformable Image Registration for 4DCT Pulmonary Images},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Registering Retinal Vessel Images From Local to Global via Multiscale and Multicycle Features
Haiyong Zheng,
Lin Chang,
Tengda Wei,
Xinxin Qiu,
Ping Lin,
Yangfan Wang
[pdf]
[bibtex]
@InProceedings{Zheng_2016_CVPR_Workshops,
author = {Zheng, Haiyong and Chang, Lin and Wei, Tengda and Qiu, Xinxin and Lin, Ping and Wang, Yangfan},
title = {Registering Retinal Vessel Images From Local to Global via Multiscale and Multicycle Features},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

The Design of SuperElastix -- A Unifying Framework for a Wide Range of Image Registration Methodologies
Floris F. Berendsen,
Kasper Marstal,
Stefan Klein,
Marius Staring
[pdf]
[bibtex]
@InProceedings{Berendsen_2016_CVPR_Workshops,
author = {Berendsen, Floris F. and Marstal, Kasper and Klein, Stefan and Staring, Marius},
title = {The Design of SuperElastix -- A Unifying Framework for a Wide Range of Image Registration Methodologies},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Tumor Growth Estimation via Registration of DCE-MRI Derived Tumor Specific Descriptors
Thais Roque,
Bartlomiej W. Papiez,
Veerle Kersemans,
Sean Smart,
Danny Allen,
Michael Chappell,
Julia A. Schnabel
[pdf]
[bibtex]
@InProceedings{Roque_2016_CVPR_Workshops,
author = {Roque, Thais and Papiez, Bartlomiej W. and Kersemans, Veerle and Smart, Sean and Allen, Danny and Chappell, Michael and Schnabel, Julia A.},
title = {Tumor Growth Estimation via Registration of DCE-MRI Derived Tumor Specific Descriptors},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Graph-Constrained Surface Registration Based on Tutte Embedding
Wei Zeng,
Yi-Jun Yang,
Muhammad Razib
[pdf]
[bibtex]
@InProceedings{Zeng_2016_CVPR_Workshops,
author = {Zeng, Wei and Yang, Yi-Jun and Razib, Muhammad},
title = {Graph-Constrained Surface Registration Based on Tutte Embedding},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy
Marcel Tella-Amo,
Pankaj Daga,
Francois Chadebecq,
Stephen Thompson,
Dzhoshkun I. Shakir,
George Dwyer,
Ruwan Wimalasundera,
Jan Deprest,
Danail Stoyanov,
Tom Vercauteren,
Sebastien Ourselin
[pdf]
[bibtex]
@InProceedings{Tella-Amo_2016_CVPR_Workshops,
author = {Tella-Amo, Marcel and Daga, Pankaj and Chadebecq, Francois and Thompson, Stephen and Shakir, Dzhoshkun I. and Dwyer, George and Wimalasundera, Ruwan and Deprest, Jan and Stoyanov, Danail and Vercauteren, Tom and Ourselin, Sebastien},
title = {A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Reducing Drift in Mosaicing Slit-Lamp Retinal Images
Kristina Prokopetc,
Adrien Bartoli
[pdf]
[bibtex]
@InProceedings{Prokopetc_2016_CVPR_Workshops,
author = {Prokopetc, Kristina and Bartoli, Adrien},
title = {Reducing Drift in Mosaicing Slit-Lamp Retinal Images},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

How to Build an Average Model When Samples Are Variably Incomplete? Application to Fossil Data
Jean Dumoncel,
Gerard Subsol,
Stanley Durrleman,
Jean-Pierre Jessel,
Amelie Beaudet,
Jose Braga
[pdf]
[bibtex]
@InProceedings{Dumoncel_2016_CVPR_Workshops,
author = {Dumoncel, Jean and Subsol, Gerard and Durrleman, Stanley and Jessel, Jean-Pierre and Beaudet, Amelie and Braga, Jose},
title = {How to Build an Average Model When Samples Are Variably Incomplete? Application to Fossil Data},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Population Shape Collapse in Large Deformation Registration of MR Brain Images
Wei Shao,
Gary E. Christensen,
Hans J. Johnson,
Joo Hyun Song,
Oguz C. Durumeric,
Casey P. Johnson,
Joseph J. Shaffer,
Vincent A. Magnotta,
Jess G. Fiedorowicz,
John A. Wemmie
[pdf]
[bibtex]
@InProceedings{Shao_2016_CVPR_Workshops,
author = {Shao, Wei and Christensen, Gary E. and Johnson, Hans J. and Hyun Song, Joo and Durumeric, Oguz C. and Johnson, Casey P. and Shaffer, Joseph J. and Magnotta, Vincent A. and Fiedorowicz, Jess G. and Wemmie, John A.},
title = {Population Shape Collapse in Large Deformation Registration of MR Brain Images},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Registration of Developmental Image Sequences With Missing Data
Istvan Csapo,
Yundi Shi,
Mar Sanchez,
Martin Styner,
Marc Niethammer
[pdf]
[bibtex]
@InProceedings{Csapo_2016_CVPR_Workshops,
author = {Csapo, Istvan and Shi, Yundi and Sanchez, Mar and Styner, Martin and Niethammer, Marc},
title = {Registration of Developmental Image Sequences With Missing Data},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Current- and Varifold-Based Registration of Lung Vessel and Airway Trees
Yue Pan,
Gary E. Christensen,
Oguz C. Durumeric,
Sarah E. Gerard,
Joseph M. Reinhardt,
Geoffrey D. Hugo
[pdf]
[bibtex]
@InProceedings{Pan_2016_CVPR_Workshops,
author = {Pan, Yue and Christensen, Gary E. and Durumeric, Oguz C. and Gerard, Sarah E. and Reinhardt, Joseph M. and Hugo, Geoffrey D.},
title = {Current- and Varifold-Based Registration of Lung Vessel and Airway Trees},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

SimpleElastix: A User-Friendly, Multi-Lingual Library for Medical Image Registration
Kasper Marstal,
Floris Berendsen,
Marius Staring,
Stefan Klein
[pdf]
[bibtex]
@InProceedings{Marstal_2016_CVPR_Workshops,
author = {Marstal, Kasper and Berendsen, Floris and Staring, Marius and Klein, Stefan},
title = {SimpleElastix: A User-Friendly, Multi-Lingual Library for Medical Image Registration},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Effects of Resolution and Registration Algorithm on the Accuracy of EPI vNavs for Real Time Head Motion Correction in MRI
Yingzhuo Zhang,
Iman Aganj,
Andre J. van der Kouwe,
M. Dylan Tisdall
[pdf]
[bibtex]
@InProceedings{Zhang_2016_CVPR_Workshops,
author = {Zhang, Yingzhuo and Aganj, Iman and van der Kouwe, Andre J. and Dylan Tisdall, M.},
title = {Effects of Resolution and Registration Algorithm on the Accuracy of EPI vNavs for Real Time Head Motion Correction in MRI},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Graph Cuts-Based Registration Revisited: A Novel Approach for Lung Image Registration Using Supervoxels and Image-Guided Filtering
Adam Szmul,
Bartlomiej W. Papiez,
Russell Bates,
Andre Hallack,
Julia A. Schnabel,
Vicente Grau
[pdf]
[bibtex]
@InProceedings{Szmul_2016_CVPR_Workshops,
author = {Szmul, Adam and Papiez, Bartlomiej W. and Bates, Russell and Hallack, Andre and Schnabel, Julia A. and Grau, Vicente},
title = {Graph Cuts-Based Registration Revisited: A Novel Approach for Lung Image Registration Using Supervoxels and Image-Guided Filtering},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Multi-Atlas Based Pseudo-CT Synthesis Using Multimodal Image Registration and Local Atlas Fusion Strategies
Johanna Degen,
Mattias P. Heinrich
[pdf]
[bibtex]
@InProceedings{Degen_2016_CVPR_Workshops,
author = {Degen, Johanna and Heinrich, Mattias P.},
title = {Multi-Atlas Based Pseudo-CT Synthesis Using Multimodal Image Registration and Local Atlas Fusion Strategies},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

A Fast DRR Generation Scheme for 3D-2D Image Registration Based on the Block Projection Method
Zhiping Mu
[pdf]
[bibtex]
@InProceedings{Mu_2016_CVPR_Workshops,
author = {Mu, Zhiping},
title = {A Fast DRR Generation Scheme for 3D-2D Image Registration Based on the Block Projection Method},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Optimal Estimation of Diffusion in DW-MRI by High-Order MRF-Based Joint Deformable Registration and Diffusion Modeling
Evgenios N. Kornaropoulos,
Evangelia I. Zacharaki,
Pierre Zerbib,
Chieh Lin,
Alain Rahmouni,
Nikos Paragios
[pdf]
[bibtex]
@InProceedings{Kornaropoulos_2016_CVPR_Workshops,
author = {Kornaropoulos, Evgenios N. and Zacharaki, Evangelia I. and Zerbib, Pierre and Lin, Chieh and Rahmouni, Alain and Paragios, Nikos},
title = {Optimal Estimation of Diffusion in DW-MRI by High-Order MRF-Based Joint Deformable Registration and Diffusion Modeling},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Total Correlation-Based Groupwise Image Registration for Quantitative MRI
Jean-Marie Guyader,
Wyke Huizinga,
Valerio Fortunati,
Dirk H. J. Poot,
Matthijs van Kranenburg,
Jifke F. Veenland,
Margarethus M. Paulides,
Wiro J. Niessen,
Stefan Klein
[pdf]
[bibtex]
@InProceedings{Guyader_2016_CVPR_Workshops,
author = {Guyader, Jean-Marie and Huizinga, Wyke and Fortunati, Valerio and Poot, Dirk H. J. and van Kranenburg, Matthijs and Veenland, Jifke F. and Paulides, Margarethus M. and Niessen, Wiro J. and Klein, Stefan},
title = {Total Correlation-Based Groupwise Image Registration for Quantitative MRI},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}

Multimodal Whole Brain Registration: MRI and High Resolution Histology
Maryana Alegro,
Edson Amaro-Jr,
Burlen Loring,
Helmut Heinsen,
Eduardo Alho,
Lilla Zollei,
Daniela Ushizima,
Lea T. Grinberg
[pdf]
[bibtex]
@InProceedings{Alegro_2016_CVPR_Workshops,
author = {Alegro, Maryana and Amaro-Jr, Edson and Loring, Burlen and Heinsen, Helmut and Alho, Eduardo and Zollei, Lilla and Ushizima, Daniela and Grinberg, Lea T.},
title = {Multimodal Whole Brain Registration: MRI and High Resolution Histology},
booktitle = {The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops},
month = {June},
year = {2016}
}